PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_co8310175.1_g000001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | GRAS | ||||||||
Protein Properties | Length: 160aa MW: 17771.1 Da PI: 5.9922 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 154.4 | 1e-47 | 9 | 147 | 234 | 374 |
GRAS 234 lsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWre 317 l Pkvv+vveq+++h ++sFl rf+ea++yysalfdsl+a++++eseer++vE++ll+rei+nv+a g +r + + +++Wre Rmu_co8310175.1_g000001.1 9 LAPKVVTVVEQDLSH-AGSFLGRFVEAIHYYSALFDSLSASYGEESEERHVVEQQLLSREIRNVLAVGGPSRSGEVK-FHNWRE 90 78*************.899****************************************************888776.****** PP GRAS 318 rleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374 +++++GF+ ++l +aa+qa lll +++sdgy++ e++g+l lgWkd L+++SaWr Rmu_co8310175.1_g000001.1 91 KFQQSGFRGISLAGNAATQATLLLGMFPSDGYTLVEDNGTLKLGWKDLCLLTASAWR 147 ********************************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 160 aa Download sequence |
MLDWSPLLLA PKVVTVVEQD LSHAGSFLGR FVEAIHYYSA LFDSLSASYG EESEERHVVE 60 QQLLSREIRN VLAVGGPSRS GEVKFHNWRE KFQQSGFRGI SLAGNAATQA TLLLGMFPSD 120 GYTLVEDNGT LKLGWKDLCL LTASAWRPPY LATTNPNLHY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G54220.1 | 7e-89 | GRAS family protein |