PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_co8300361.1_g000001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | B3 | ||||||||
Protein Properties | Length: 79aa MW: 9315.64 Da PI: 9.8592 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 44.7 | 2.4e-14 | 2 | 78 | 18 | 99 |
--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 18 lpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 lp f+++h k ++ ++l ++ W v+l +rk+ +++GW eFv+ ++LkegD + F+l+++++f + v++fr+ Rmu_co8300361.1_g000001.1 2 LPSAFVQKHLDK--RPSHVSLWGSNDIYWPVELHFRKGA---SFQGGWIEFVQRHNLKEGDACGFELTEKRKFLFDVHIFRT 78 899******655..4447***************777765...58***********************999999999**9997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 79 aa Download sequence |
KLPSAFVQKH LDKRPSHVSL WGSNDIYWPV ELHFRKGASF QGGWIEFVQR HNLKEGDACG 60 FELTEKRKFL FDVHIFRTT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G49480.1 | 2e-12 | B3 family protein |