PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_co8288493.1_g000001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | NAC | ||||||||
Protein Properties | Length: 162aa MW: 19163.6 Da PI: 6.3591 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 82 | 1.2e-25 | 16 | 149 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleev.ikevd.iykvePwdLpk......kvkaeek......ewyfFskrdkkyat 70 l pG+rF P +eel+ +yL++kv+g++++ e+ i + + ++ ePwd+ k + ++yfF++r+k + + Rmu_co8288493.1_g000001.1 16 LLPGYRFCPLEEELILRYLCPKVKGEEVPGEDYlIFNSNlYCEQEPWDIWDmykerrK-----NdlrfnkDLYFFTQRKKMTVN 94 579************************99988767777615788*****642333221.....123333377************ PP NAM 71 gkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 +rk r++ sg+Wk k+v++ +g +vg +k +++ k + + ++ +W+m e++l Rmu_co8288493.1_g000001.1 95 ASRKGRSIGSGTWKGGDAAKNVYA-SGIVVGYRKRFTYEK--KGSEQHGRWIMLEFEL 149 ************************.999*********984..4444689*******97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 162 aa Download sequence |
MDIHEDGNEL HDEHQLLPGY RFCPLEEELI LRYLCPKVKG EEVPGEDYLI FNSNLYCEQE 60 PWDIWDMYKE RRKNDLRFNK DLYFFTQRKK MTVNASRKGR SIGSGTWKGG DAAKNVYASG 120 IVVGYRKRFT YEKKGSEQHG RWIMLEFELD HSQVGMLDQQ VS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46770.1 | 6e-18 | NAC family protein |