PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_co8273153.1_g000001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | NAC | ||||||||
Protein Properties | Length: 95aa MW: 11515.1 Da PI: 8.7319 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 41.2 | 5.2e-13 | 15 | 95 | 2 | 73 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykv.ePwdLpkkvka.......eekewyfFskrdkkyatgkr 73 pG rF P d+elv +yLk+ ++g++++ + + ++d+y+ ePw++ +++k+ +k++yfF++++k ++t+kr Rmu_co8273153.1_g000001.1 15 LPGQRFCPMDDELVLFYLKPMLSGQNVPGRNRvVFDCDLYSQqEPWEIWEAFKTrrphdlrLNKDIYFFTQHKKMSSTDKR 95 59************************8775544999**997659****753333223333334588*******99988765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 95 aa Download sequence |
MQREFPMENS RGNQLPGQRF CPMDDELVLF YLKPMLSGQN VPGRNRVVFD CDLYSQQEPW 60 EIWEAFKTRR PHDLRLNKDI YFFTQHKKMS STDKR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G24430.2 | 2e-07 | NAC family protein |