PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_co8262069.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family M-type_MADS
Protein Properties Length: 68aa    MW: 8073.41 Da    PI: 5.691
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_co8262069.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF38.71.3e-121281542
                               HHHHHHHHHHHHHHHHHT-EEEEEEE-T CS
                     SRF-TF 15 kRrngilKKAeELSvLCdaevaviifss 42
                               kR++g+lKK +E+ +LCd+++a ii+s+
  Rmu_co8262069.1_g000001.1  1 KRKEGLLKKVYEITTLCDIKAAAIIYSP 28
                               9**************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 68 aa     Download sequence    
KRKEGLLKKV YEITTLCDIK AAAIIYSPFD FELEVFPSHF EVHEMLMRFQ DMSEKDKTKN  60
MVNQEAFL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G05860.27e-18M-type_MADS family protein