PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_co8247875.1_g000001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | B3 | ||||||||
Protein Properties | Length: 131aa MW: 14886.1 Da PI: 10.7772 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 59.3 | 6.6e-19 | 51 | 128 | 5 | 86 |
-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS B3 5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 ++s++ + + l+lp kfa+++ k +++ +l+ s ++W+v++ r r+++++GW eFv++n+Lk+gD ++F+l++ Rmu_co8247875.1_g000001.1 51 SLHSSYITGHYLYLPAKFANRYLVK--QPRHAILRVASKKTWSVNV--RYAAARTTFQTGWFEFVQDNDLKQGDACIFMLTD 128 45789999999***********544..55679**************..77778899***********************876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 131 aa Download sequence |
MRPSSRTQKF PEGGPEVPRK MPGPVMASSG KYIALQRANG FKSANPDFRI SLHSSYITGH 60 YLYLPAKFAN RYLVKQPRHA ILRVASKKTW SVNVRYAAAR TTFQTGWFEF VQDNDLKQGD 120 ACIFMLTDNI K |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G49480.1 | 8e-18 | B3 family protein |