PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_co8196374.1_g000001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | GRAS | ||||||||
Protein Properties | Length: 152aa MW: 17198.7 Da PI: 7.1951 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 108.7 | 8e-34 | 37 | 151 | 1 | 121 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdg.dpmqRlaayfteALaarlarsvselykalppsetseknsseelaalkl 83 l++lL+ecA a+s ++ +a+++L +l ++asp+g + +R++ayf++A+++r+++s+ ++++ l ++ a+++ Rmu_co8196374.1_g000001.1 37 LITLLFECAVAISVENPGEAHRMLLELTQMASPYGpSCAERVVAYFAKAMSSRVLNSWLGICSPLVNYKS-------IHGAFQV 113 5789*******************************9999***********************87765554.......467999* PP GRAS 84 fsevsPilkfshltaNqaIleavegeervHiiDfdisq 121 f+ +sP++kf+h+t NqaIlea+++ +rvHiiD+di+q Rmu_co8196374.1_g000001.1 114 FNTISPFIKFAHFTSNQAILEAFHRRDRVHIIDLDIMQ 151 ************************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 152 aa Download sequence |
ADRVDYDLQW GNELQLHAEN NRRARGLSKL DQHGLTLITL LFECAVAISV ENPGEAHRML 60 LELTQMASPY GPSCAERVVA YFAKAMSSRV LNSWLGICSP LVNYKSIHGA FQVFNTISPF 120 IKFAHFTSNQ AILEAFHRRD RVHIIDLDIM QV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G54220.1 | 2e-37 | GRAS family protein |