PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_co8157236.1_g000001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | TCP | ||||||||
Protein Properties | Length: 77aa MW: 8552.65 Da PI: 11.9214 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 24.4 | 9.6e-08 | 56 | 77 | 1 | 22 |
TCP 1 aagkkdrhskihTkvggRdRRv 22 a+g+kdrhsk++T++g+Rd Rv Rmu_co8157236.1_g000001.1 56 ATGRKDRHSKVCTAKGLRDHRV 77 589*****************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 77 aa Download sequence |
PTIEYAGRKM RESHNNLHHR AMTSSSAASR LGLGIRTAFS STTNETVEAR GHILRATGRK 60 DRHSKVCTAK GLRDHRV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G53230.1 | 2e-10 | TCP family protein |