PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_co8139852.1_g000001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | MYB_related | ||||||||
Protein Properties | Length: 177aa MW: 19562.6 Da PI: 4.3255 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 24.3 | 7e-08 | 1 | 23 | 24 | 47 |
HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 24 WktIartmgkgRtlkqcksrwqky 47 W++Ia +++ gRt++++k++w++ Rmu_co8139852.1_g000001.1 1 WSLIAGRIP-GRTDNEIKNYWNSI 23 *********.***********975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 177 aa Download sequence |
WSLIAGRIPG RTDNEIKNYW NSILKKNVGE EKERESEVSR NEIFKKNLPS LAEDDGHPHL 60 TKCDEVLGGG GGLVCFASDV NVEEDHRRRC LGRTSTDTTT LSPGVGVEIG GGANKDIQPT 120 GDDLNYNAIA WKDSIMDLNG GQLDISEFLQ SDFSTFWDSD RLMNFEIGGC STMNYDL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G14750.1 | 8e-12 | MYB family protein |