PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_co8138760.1_g000001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | TCP | ||||||||
Protein Properties | Length: 117aa MW: 13126.8 Da PI: 10.3986 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 82.5 | 1.1e-25 | 55 | 116 | 2 | 63 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikelt 63 + +kd hsk++T++g Rd RvRl ++ ++f+d+qd+L +d++sk+i+W +++ak+ai+el+ Rmu_co8138760.1_g000001.1 55 TDRKDCHSKVYTAKGARDHRVRLATHTTIQFYDVQDRLRYDRPSKAIDWVIKKAKAAIDELP 116 569*********************************************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 117 aa Download sequence |
MEYAGRKMGE SHNSLHHRAM TSSSTASRLG LGIRTASSSN TSEIVEAPGH ILRPTDRKDC 60 HSKVYTAKGA RDHRVRLATH TTIQFYDVQD RLRYDRPSKA IDWVIKKAKA AIDELPP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G15030.2 | 3e-32 | TCP family protein |