PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_co8136506.1_g000001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | G2-like | ||||||||
Protein Properties | Length: 206aa MW: 22409.2 Da PI: 9.4713 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 96.3 | 2.4e-30 | 51 | 104 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 +prl+Wtp+LH+rFv++v++L G+++A+Pkti++lm+v+gLt+e+v+SHLQkYRl Rmu_co8136506.1_g000001.1 51 RPRLVWTPQLHKRFVDVVAHL-GIKNAVPKTIMQLMNVEGLTRENVASHLQKYRL 104 59*******************.********************************8 PP | |||||||
2 | Myb_DNA-binding | 49.4 | 1.1e-15 | 53 | 103 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r+ WT+++++++vd+v+ lG + +ktI++ m+ +g+t++++ s++qky+ Rmu_co8136506.1_g000001.1 53 RLVWTPQLHKRFVDVVAHLGIKnaVPKTIMQLMNvEGLTRENVASHLQKYR 103 789*******************9***************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 206 aa Download sequence |
ETEPYGGGGG REGSDSRKSR RVDSPEEADS ALRIENSSGG GDDPSGRAVK RPRLVWTPQL 60 HKRFVDVVAH LGIKNAVPKT IMQLMNVEGL TRENVASHLQ KYRLYLKRMQ GLSNEGPSSS 120 DPLFASTPVP QSLHESGGSG PGHRQGHMPI SIPMPYPPGA MMAMPGYMGM SGGYHGFESH 180 PSYNMMQQHK YGSMVSYPPH VAPNEK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G46640.2 | 2e-57 | G2-like family protein |