PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_co7992216.1_g000001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | C2H2 | ||||||||
Protein Properties | Length: 142aa MW: 15805.9 Da PI: 9.4068 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 13.5 | 0.00022 | 47 | 69 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + +s+ k H + + Rmu_co7992216.1_g000001.1 47 WKCDKCSKKYAVQSDWKAHSKIC 69 58*****************9876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 142 aa Download sequence |
QRSSKEIKKR VYVCPEASCV HHDPSRALGD LTGIKKHFCR KHGEKKWKCD KCSKKYAVQS 60 DWKAHSKICG TREYKCDCGT LFSRRDSFIT HRAFCDALAE ESARGPSQTQ NVNLNSESDP 120 KVQTVNSPPP AAAAQASVPS QP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G50700.1 | 1e-60 | C2H2 family protein |