PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_co7983716.1_g000001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | NAC | ||||||||
Protein Properties | Length: 82aa MW: 9157.61 Da PI: 11.2237 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 72.7 | 9.1e-23 | 1 | 57 | 70 | 128 |
NAM 70 tgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 +g+r+nra+ sgyWkatg dk++ + vg+kk Lvfy g+ap+gekt+W+mheyrl Rmu_co7983716.1_g000001.1 1 NGSRPNRAAGSGYWKATGADKPIGL--PKPVGIKKALVFYAGKAPRGEKTNWIMHEYRL 57 689********************99..789***************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 82 aa Download sequence |
NGSRPNRAAG SGYWKATGAD KPIGLPKPVG IKKALVFYAG KAPRGEKTNW IMHEYRLADV 60 DRTPRKRNSL RVIINLLDNL WA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G01720.1 | 2e-42 | NAC family protein |