PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RcHm_v2.0_Chr5g0078151 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | EIL | ||||||||
Protein Properties | Length: 605aa MW: 67685 Da PI: 5.3583 | ||||||||
Description | EIL family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | EIN3 | 428.7 | 5.6e-131 | 37 | 373 | 1 | 319 |
XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvega 87 eel++rmwkd+++lkr+ke++k e+++a ++ k +++++qarrkkmsraQDgiLkYMlk mevc+a+GfvYgiipekgkpv+ga RcHm_v2.0_Chr5g0078151 37 EELERRMWKDRIKLKRIKEKQKI--EAQQA-AERLKPKQTTDQARRKKMSRAQDGILKYMLKLMEVCQARGFVYGIIPEKGKPVSGA 120 8**************99998885..55666.889999************************************************** PP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH-- CS EIN3 88 sdsLraWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWP 174 sd++raWWkekv+fd+ngpaai ky+a+ l++++++++ ++ ++++ l++lqD+tlgSLLs+lmqhcdppqr++plek+v+pPWWP RcHm_v2.0_Chr5g0078151 121 SDNIRAWWKEKVKFDKNGPAAIDKYEAEILAMTDADNN--RNGNSQTILQDLQDATLGSLLSSLMQHCDPPQRKYPLEKAVPPPWWP 205 ****************************9999998888..7899******************************************* PP -S--HHHHHHT--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XX CS EIN3 175 tGkelwwgelglskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvs 261 tG+e+ww + gl+ q+ ppykkphdlkk+wkv+vLtavikhmsp+i++ir+++rqsk+lqdkm+akes+++l vl++ee+++++ s RcHm_v2.0_Chr5g0078151 206 TGSEDWWMKSGLPCGQS-PPYKKPHDLKKMWKVGVLTAVIKHMSPDIAKIRRHVRQSKCLQDKMTAKESAIWLGVLSREEALIRQPS 291 ****************9.9******************************************************************** PP XXXX........XXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXX.........................XXXXXXXXXXXXX CS EIN3 262 ahss........slrkqspkvtlsceqkedvegkkeskikhvqavktta.........................gfpvvrkrkkkps 315 +++ +++++ t+s+++++dv+g++++ i + + ++ + + +++ RcHm_v2.0_Chr5g0078151 292 SDNGtsgitempRRGRGEKHATASSNSDYDVDGTDKELIDAGSVSSKDDrrtelmdvepssnlrsstptnhvqdK---------ERG 369 **444567775433449999************8888886643333333355688998999999986665555532.........222 PP XXXX CS EIN3 316 esak 319 e++ RcHm_v2.0_Chr5g0078151 370 EKRR 373 2222 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 605 aa Download sequence |
MGDLGEVGPE ISSDIEEDLR CDNLVEKDVS DEEIDPEELE RRMWKDRIKL KRIKEKQKIE 60 AQQAAERLKP KQTTDQARRK KMSRAQDGIL KYMLKLMEVC QARGFVYGII PEKGKPVSGA 120 SDNIRAWWKE KVKFDKNGPA AIDKYEAEIL AMTDADNNRN GNSQTILQDL QDATLGSLLS 180 SLMQHCDPPQ RKYPLEKAVP PPWWPTGSED WWMKSGLPCG QSPPYKKPHD LKKMWKVGVL 240 TAVIKHMSPD IAKIRRHVRQ SKCLQDKMTA KESAIWLGVL SREEALIRQP SSDNGTSGIT 300 EMPRRGRGEK HATASSNSDY DVDGTDKELI DAGSVSSKDD RRTELMDVEP SSNLRSSTPT 360 NHVQDKERGE KRRKRKRAPV RPSSDDKLPA PSHNEPLHVE PLNALPDINH TDAQMIGFPI 420 HENQQENVSV TTLRPPEQDL DVQALPASEF NYYADVPPDG VTATTQGMHV GGTPLLYHGM 480 QSAEMHHGNM YNLYNPSAEL VPGHDRQLSQ IGMNELQIGP ADVVPLQTIR NGNEITGGDM 540 PFYAKDPFQS EQDRTVDANF GSSIDSLSLD YGGLFNSPFR LDLGIEGTGS LDDLNVDEMM 600 AYFAA |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 371 | 377 | KRRKRKR |
2 | 372 | 377 | RRKRKR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G73730.1 | 0.0 | EIL family protein |