PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RcHm_v2.0_Chr3g0466831

Organism

Rosa chinensis

Taxonomic ID

74649

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

Dof

Protein Properties

Length: 381aa MW: 40270.3 Da PI: 9.4432

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RcHm_v2.0_Chr3g0466831	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	123.7	6e-39	92	151	3	62
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 e alkcprC+stntkfCy+nnysl+qPr+fCk+CrryWt+GGalrnvPvGgg+r+nk+ss RcHm_v2.0_Chr3g0466831 92 EPALKCPRCESTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKRSS 151 6789*****************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 381 aa Download sequence
MVFSSIPAYL DPANWQQQPS PHHHHHHHLL SGSSNNNNSN NINNSQLHPL PPPPPPPPSN 60 PGGGGSGPGG AGSIRPGSMA DRARMANIPM PEPALKCPRC ESTNTKFCYF NNYSLTQPRH 120 FCKTCRRYWT RGGALRNVPV GGGCRRNKRS SKGGSSRSKS PVSSSDRPTG SASSSGQAIP 180 SNSSTGTVDM IAAGLSPQIP PLRFINPFND HHFAASENLG LNYGMNYGGG GVGDLGFQIG 240 SGLGGGITST PTGSLFEQQW RFQQQTPSFP FLSGGLDPSP GLFEGSGVEF PGYNQVRPRL 300 LSSGSSVGVS SQMASVKTED PHHQNHQQQE LNLSRQLLGI QGGNDSQYWI NSGGNGNGTS 360 TTAWTDLSGF SSTSTATNHP L

Sequence ? help Back to Top

Protein Sequence Length: 381 aa Download sequence

MVFSSIPAYL DPANWQQQPS PHHHHHHHLL SGSSNNNNSN NINNSQLHPL PPPPPPPPSN  60
PGGGGSGPGG AGSIRPGSMA DRARMANIPM PEPALKCPRC ESTNTKFCYF NNYSLTQPRH  120
FCKTCRRYWT RGGALRNVPV GGGCRRNKRS SKGGSSRSKS PVSSSDRPTG SASSSGQAIP  180
SNSSTGTVDM IAAGLSPQIP PLRFINPFND HHFAASENLG LNYGMNYGGG GVGDLGFQIG  240
SGLGGGITST PTGSLFEQQW RFQQQTPSFP FLSGGLDPSP GLFEGSGVEF PGYNQVRPRL  300
LSSGSSVGVS SQMASVKTED PHHQNHQQQE LNLSRQLLGI QGGNDSQYWI NSGGNGNGTS  360
TTAWTDLSGF SSTSTATNHP L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37590.1	9e-37	Dof family protein