PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RcHm_v2.0_Chr1g0331011
Organism
Rosa chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family EIL
Protein Properties Length: 607aa    MW: 68427.2 Da    PI: 5.1451
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RcHm_v2.0_Chr1g0331011genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3485.63e-148474181354
                             XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
                    EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvega 87 
                             +el++rmw+d++ll+rl+e++k     ke  ++++++++s+eqarrkkmsraQDgiLkYMlk+mevc+aqGfvYgiipekgkpv+ga
  RcHm_v2.0_Chr1g0331011  47 DELERRMWRDRILLRRLREQNKG----KEG-ADNARQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVSGA 128
                             79******************998....677.777889************************************************** PP

                             XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH-- CS
                    EIN3  88 sdsLraWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWP 174
                             sd+Lr+WWk+kv+fdrngpaaiskyqa+n i++  +++ ++  s++h+l+elqDTtlgSLLsalmqhcdppqrrfplekgv+pPWWP
  RcHm_v2.0_Chr1g0331011 129 SDNLREWWKDKVRFDRNGPAAISKYQADNSIPGLMEDC-ISVASTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVSPPWWP 214
                             *********************************99999.669********************************************* PP

                             -S--HHHHHHT--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XX CS
                    EIN3 175 tGkelwwgelglskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvs 261
                             tG+e+ww++l l+ +qg+ppykkphdlkkawkvsvLtavikhmsp+i++ir+l+rqsk+lqdkm+akes+++l++++qee +++++ 
  RcHm_v2.0_Chr1g0331011 215 TGNEEWWPQLNLA-NQGPPPYKKPHDLKKAWKVSVLTAVIKHMSPDINKIRKLVRQSKCLQDKMTAKESATWLAIIHQEEVMARKMF 300
                             ********99887.7899********************************************************************* PP

                             XX..XXXXXXXXXXXXXXXXXXXXXXXXXXXX..XXXXXXXXXX.......................XXXXXXXXXXXXXXXXXXXX CS
                    EIN3 262 ah..ssslrkqspkvtlsceqkedvegkkesk.ikhvqavktta.......................gfpvvrkrkkkpsesakvss 322
                             ++  ++ +  +s ++++s  +++dveg ++ +   +v+ +k                          + ++ +krk++++e+ +++ 
  RcHm_v2.0_Chr1g0331011 301 PDkcPPLSAGGSGSFVISGTSDYDVEGVDDDEqNVEVEDCK--PllnhfnmgsigqrpqikgelietNSDFGKKRKQQQAEEPQMML 385
                             **85556666****************555555023344444..35689*******************99******999988888887 PP

                             X......XXXXXXX.XXXX.XXXXXXXXXXXXX CS
                    EIN3 323 kevsrtcqssqfrgsetel.ifadknsisqney 354
                             ++ ++tc+  q+++s++++ +f d ++++++++
  RcHm_v2.0_Chr1g0331011 386 NQKVYTCEFLQCPYSDYRIgGFCDITARNNHQM 418
                             8788*************984599****999986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 607 aa     Download sequence    
MGMFEEMGFC GNLDFLSAAA GVGEVVLEQE PEATVEEDYS DEEMDVDELE RRMWRDRILL  60
RRLREQNKGK EGADNARQRQ SQEQARRKKM SRAQDGILKY MLKMMEVCKA QGFVYGIIPE  120
KGKPVSGASD NLREWWKDKV RFDRNGPAAI SKYQADNSIP GLMEDCISVA STPHTLQELQ  180
DTTLGSLLSA LMQHCDPPQR RFPLEKGVSP PWWPTGNEEW WPQLNLANQG PPPYKKPHDL  240
KKAWKVSVLT AVIKHMSPDI NKIRKLVRQS KCLQDKMTAK ESATWLAIIH QEEVMARKMF  300
PDKCPPLSAG GSGSFVISGT SDYDVEGVDD DEQNVEVEDC KPLLNHFNMG SIGQRPQIKG  360
ELIETNSDFG KKRKQQQAEE PQMMLNQKVY TCEFLQCPYS DYRIGGFCDI TARNNHQMSC  420
PYRNNFSPVF AMPNLLDNDK PAGFPLPVAQ AKPAVIQQVN QTSPYNVSGL GLADDGQKMI  480
SELMSSYDSN TQHSPNPGNL NAVQDHNHQQ AKFQYPVNDN FYGQGMVMDR NNVPEPTPMP  540
MLQQVFPSPE VQFDQCKVFD SAFGNNPNDV IPDLRFGSGS QFSLASPDYN VGNSLLKQDA  600
ASSFWYI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20770.10.0EIL family protein