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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW34599.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | ERF | ||||||||
Protein Properties | Length: 260aa MW: 27910.1 Da PI: 8.3343 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 64.8 | 1.8e-20 | 87 | 137 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkklege 56 +++GVr+++ +g+W+AeIrdp + +r++lg+f+tae Aa+a+++a+++++g+ RWW34599.1 87 RFRGVRQRP-WGKWAAEIRDP-----HkaARVWLGTFDTAEAAARAYDEAALRFRGN 137 69*******.**********7.....337*************************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 260 aa Download sequence |
MSVMVSTLAH VVAGEDGASL PSLPSRGGQN GGGRQMRGRE SFVHEEVPRF CITFGSSPGE 60 SSSAAASAGG REHARAAAGA EQGCRRRFRG VRQRPWGKWA AEIRDPHKAA RVWLGTFDTA 120 EAAARAYDEA ALRFRGNRAK LNFPLDARVR QAPAAEPPSA APAALLESRP FDDAMREYWE 180 YSRLLQGAED GRGMPPPSLL DETICCRANP ASPLTAAAGA SGHPLSPLLY PRASEQQMEN 240 LQLPPWTESS HYYPPSSSSG |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 26 | 34 | RGGQNGGGR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G50080.1 | 3e-16 | ERF family protein |