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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW34354.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | ERF | ||||||||
Protein Properties | Length: 283aa MW: 31341.1 Da PI: 9.2535 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 54 | 4.3e-17 | 99 | 148 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr ++ +g+Wv+eIr p ++++r++lg++ t+e Aa+a++aa ++ +g RWW34354.1 99 QYRGVRMRS-WGSWVSEIRAP---NQKTRIWLGSYSTPEAAARAYDAALLCVKG 148 69****998.**********9...336*********************999776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 283 aa Download sequence |
MSSTRLSSIN KLQAPFRAYK KIAFACAEER ERERERERER ERTAQKRSHR RRRHHRAAMV 60 KNSSSSSKVL QAADGYIGVA NNPHGSNIPP KLGSNGKRQY RGVRMRSWGS WVSEIRAPNQ 120 KTRIWLGSYS TPEAAARAYD AALLCVKGNS ARLNFPAAPC IQLPDTTMSP RSIQRMAAAA 180 AAAAAANATL PFPSPDTTPP SSPLDSFLPP SSDTSDDETS RTISPEEEGM LSGHFLMDPS 240 INFEAFFQSP KCMDHMLNAS AFFAPSQAEE WEDEGDITLW SFC |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 30 | 40 | RERERERERER |
2 | 32 | 42 | RERERERERER |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G21910.1 | 2e-26 | ERF family protein |