PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW34236.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family RAV
Protein Properties Length: 318aa    MW: 35399.1 Da    PI: 10.1624
Description RAV family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW34236.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP239.71.2e-124896155
         AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                s+ykGV   + +grW A+I++      r  r++lg+fg + eAa+ ++ a+++++g
  RWW34236.1 48 SRYKGVVPQP-NGRWGAQIYE------RhHRVWLGTFGDEAEAARVYDVAAQRFRG 96
                78****9888.8*********......44**********99*************98 PP
2B392.43.2e-29173263185
                 EEEE-..-HHHHTT-EE--HHH.HTT......---....--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE- CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkke..esktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld 85 
                 f+kv tpsdv+k++rlv+pk++ae+h          +  e++ + +ed +g++W+++++y+++s++yvltkGW +Fvk+++Lk+gD v F ++
  RWW34236.1 173 FDKVVTPSDVGKLNRLVIPKQHAEKHfplkggT--AAscEGVLMNFEDATGKVWRFRYSYWNSSQSYVLTKGWIRFVKEKRLKAGDAVSFWRS 263
                 89*************************998552..22448899***********************************************854 PP
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    
MSDGEKRPEV PSPVADPIRR MGSGASVVLD PTPEVGVEAE SGRKLPSSRY KGVVPQPNGR  60
WGAQIYERHH RVWLGTFGDE AEAARVYDVA AQRFRGRDAV TNFKSLSESD DEDALVLSFL  120
AAHSKAEIVD MLRKHTYHDE LQQSKRAHAA GRGTGFGRRR TPSYYGSVRE LLFDKVVTPS  180
DVGKLNRLVI PKQHAEKHFP LKGGTAASCE GVLMNFEDAT GKVWRFRYSY WNSSQSYVLT  240
KGWIRFVKEK RLKAGDAVSF WRSMGPGKHL FIDRKPRPEN ASCTTKPVMP AHAFRLFGVT  300
ISELPVGGGI GKTAEEKE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68840.21e-116RAV family protein