PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW33449.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | HB-other | ||||||||
Protein Properties | Length: 227aa MW: 25018.7 Da PI: 8.654 | ||||||||
Description | HB-other family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 55.8 | 7.8e-18 | 22 | 76 | 3 | 57 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 kR t++qle+Le+ ++ + yps++ r eL+ k+gL++rq ++WF+ rR k++k RWW33449.1 22 KRKMKTPYQLEILESTYAVETYPSEALRGELSVKTGLSDRQLQMWFCHRRLKDRK 76 89999************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 227 aa Download sequence |
MEAGDGEQAR PPPAEGGDKP PKRKMKTPYQ LEILESTYAV ETYPSEALRG ELSVKTGLSD 60 RQLQMWFCHR RLKDRKVQSA RKHRREAESL PLTPPPPVLP PQNDSLFSSP YGSSGQSRRA 120 ATRTVAAVSR IGTEMSAVGS RYYDALLPLP PTHLGHLALM ERQILASVEA QLGEPLRQDG 180 PVLGVEFDPL PPGAFGVPIG ITSHYLDTKN IIFCYGHVIL LVHMFIS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G28420.1 | 1e-39 | HB-other family protein |