PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW33260.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family GRAS
Protein Properties Length: 541aa    MW: 60280.3 Da    PI: 8.3865
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW33260.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS422.14.6e-1291315381374
        GRAS   1 lvelLlecAeavss.gdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlta 98 
                 l++lLl+cA  v+s g+l  a+a+L+++  laspdgd+mqR+a++f+eALa+r  rs+++l++al + +  +   +e++ a++ f +++P+l++s+++a
  RWW33260.1 131 LIHLLLDCASRVASgGSLDPANAALEQIALLASPDGDAMQRIASHFAEALARRAIRSWPGLCHALDSARVLP--LAEAAVARRHFLDLCPFLRLSFVVA 227
                 689*********9968999**********************************************6666653..99999******************** PP

        GRAS  99 NqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvk 197
                 NqaI+ea+ege+ vH++D+++s ++QW++LlqaL +R+egpp+l+iTg+++    +ke l+ t+ rL++ Ae+l+vpf+f + v+++l++l++e+Lr k
  RWW33260.1 228 NQAIMEAMEGERVVHVVDLNASDPTQWIPLLQALGARSEGPPHLKITGIHE----HKEVLHYTAIRLSEAAERLDVPFQFIP-VVSSLDNLDIERLRAK 321
                 ***************************************************....9**************************.799************* PP

        GRAS 198 pgEalaVnlvlqlhrll........................................desvsleserdevLklvkslsPkvvvvveqeadhnsesFler 256
                 +gEala+++vlqlh+ll                                        ++  +++ +++++L  +++lsPk++vv+eqea+hn++++ er
  RWW33260.1 322 TGEALAISSVLQLHTLLatedvdghlrkaqriapisklslgeflekdhlanahstsaESASPQPTRIQSFLASLWRLSPKILVVTEQEANHNGQTLKER 420
                 ***************************************************99998544444445889******************************* PP

        GRAS 257 flealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveees 355
                 ++eal yy+a+fd+l+ ++pr+s er  +E++l+g+ei+n++aceg er+erhe+le+Wr+r++ +GF+++pls+    qa++ll+ ++++gy+v+ee+
  RWW33260.1 421 LVEALFYYAAVFDALDLTVPRQSVERLRLEKKLFGEEIRNIIACEGLERKERHEKLERWRQRMGISGFRALPLSYCGLLQARRLLQCFGWQGYKVKEEN 519
                 *************************************************************************************************** PP

        GRAS 356 gslvlgWkdrpLvsvSaWr 374
                 g+++++W+drpL+svSaWr
  RWW33260.1 520 GCFMMCWQDRPLFSVSAWR 538
                 ******************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 541 aa     Download sequence    
MRLQVRAPHY HRRRPRRCGR NGFSFKRGMG QRSSFAACEE GWSPWSLSAS AGNLDPASSN  60
SANLLRYLAR FICLPERAMT PLLAGVVVQD DGSSSSVTSA PLETLSLSPP SLAPHSPWVR  120
ELKSDERGLC LIHLLLDCAS RVASGGSLDP ANAALEQIAL LASPDGDAMQ RIASHFAEAL  180
ARRAIRSWPG LCHALDSARV LPLAEAAVAR RHFLDLCPFL RLSFVVANQA IMEAMEGERV  240
VHVVDLNASD PTQWIPLLQA LGARSEGPPH LKITGIHEHK EVLHYTAIRL SEAAERLDVP  300
FQFIPVVSSL DNLDIERLRA KTGEALAISS VLQLHTLLAT EDVDGHLRKA QRIAPISKLS  360
LGEFLEKDHL ANAHSTSAES ASPQPTRIQS FLASLWRLSP KILVVTEQEA NHNGQTLKER  420
LVEALFYYAA VFDALDLTVP RQSVERLRLE KKLFGEEIRN IIACEGLERK ERHEKLERWR  480
QRMGISGFRA LPLSYCGLLQ ARRLLQCFGW QGYKVKEENG CFMMCWQDRP LFSVSAWRCN  540
L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50420.11e-159GRAS family protein