PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW32939.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MIKC_MADS

Protein Properties

Length: 190aa MW: 22017.4 Da PI: 10.3679

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW32939.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	87.7	6.4e-28	10	61	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSE.EEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgk.lyeyss 51 krienk nrqvtf kRrng+lKKA+ELSvLCd++va+iifss+g+ l+e++s RWW32939.1 10 KRIENKVNRQVTFEKRRNGLLKKAYELSVLCDVDVALIIFSSRGRrLFEFCS 61 79*****************************************954999986 PP
2	K-box	14.7	1.3e-06	97	125	70	98
K-box 70 nellleqieelqkkekelqeenkaLrkkl 98 ++++++q+ +l +ke+ lqe+n++Lr++l RWW32939.1 97 MRVMFDQLCDLNRKEQVLQEANTNLRRQL 125 579***********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 190 aa Download sequence
MGRRGKVELK RIENKVNRQV TFEKRRNGLL KKAYELSVLC DVDVALIIFS SRGRRLFEFC 60 SSSRYYIHVH AKVRAVNSRV SSSISFLSFF FGRFAFMRVM FDQLCDLNRK EQVLQEANTN 120 LRRQLISLLK QKDSISPKEK THPCKLDSIY PAQLLGTMKP QKAIDSSQDG FENLSSLTSN 180 LSYFYSPIEE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G24260.3	9e-30	MIKC_MADS family protein