PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW32537.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

Trihelix

Protein Properties

Length: 616aa MW: 67713.3 Da PI: 8.9815

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW32537.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	55.4	1.6e-17	203	291	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W++ + L++a++e+ e+l+rg+l++ +We+v+ + ++++ +s +qCk+k++nl+kryk + ++ +++ +s++p+f+++e RWW32537.1 203 EWSDTAIGSLLDAYTERYEQLNRGNLRGRDWEDVATIVsercNKQKVGKSVEQCKNKIDNLKKRYKVECQRLSSG-GLPTSHWPWFKKME 291 5******************************98777665599999****************99999999.555669*****8 PP

Sequence ? help Back to Top
Protein Sequence Length: 616 aa Download sequence
MASCDDDFAL LGDEAQSQHQ PQARAVPFSA AHRYVTAKAT PISLHPRTHH HLGAASSSAP 60 SVIVSPGKKG VVVDGGGENH EGYGEAFGQT DASKCPSASA FHEHPCFAED ANPFATQHPA 120 DDDDDDGDAD NPEVKGAATS ASHHHHLQHL HHQQQPHHHS PKRKDRDDIS DGESPYCYNS 180 SMAANKKSRP MSSLGDYRKD REEWSDTAIG SLLDAYTERY EQLNRGNLRG RDWEDVATIV 240 SERCNKQKVG KSVEQCKNKI DNLKKRYKVE CQRLSSGGLP TSHWPWFKKM EQIVGSSSSL 300 KAAPDDDKSV TLGGPPAGMR QIKRSTLLSW RILHFLMGIC RICRHPISPS GPLSTNINSK 360 MRPLSNPRWK RVILKISGMA LAGAGPQNVD PKVIMLVAKE IAIASRAGLD MLCLKELEVN 420 CINEDESTRA PCGSTVIFPW LNDISAVTTG GSSPLCVRVC VLRKKRYVSG RQLPHAEGVV 480 RGKGRPLVQR TINQPVNTYS SNVKRTPSPL VELPVVLECR PDGLITNRPM RPEAFSPQRS 540 NEKEAKRRRE SDERERQKVY VSTAAAFEDC AVSIRFASRE EALPLRSTDA SLSSRVFPGQ 600 HPRVVAGVSK SRTSGV

Sequence ? help Back to Top

Protein Sequence Length: 616 aa Download sequence

MASCDDDFAL LGDEAQSQHQ PQARAVPFSA AHRYVTAKAT PISLHPRTHH HLGAASSSAP  60
SVIVSPGKKG VVVDGGGENH EGYGEAFGQT DASKCPSASA FHEHPCFAED ANPFATQHPA  120
DDDDDDGDAD NPEVKGAATS ASHHHHLQHL HHQQQPHHHS PKRKDRDDIS DGESPYCYNS  180
SMAANKKSRP MSSLGDYRKD REEWSDTAIG SLLDAYTERY EQLNRGNLRG RDWEDVATIV  240
SERCNKQKVG KSVEQCKNKI DNLKKRYKVE CQRLSSGGLP TSHWPWFKKM EQIVGSSSSL  300
KAAPDDDKSV TLGGPPAGMR QIKRSTLLSW RILHFLMGIC RICRHPISPS GPLSTNINSK  360
MRPLSNPRWK RVILKISGMA LAGAGPQNVD PKVIMLVAKE IAIASRAGLD MLCLKELEVN  420
CINEDESTRA PCGSTVIFPW LNDISAVTTG GSSPLCVRVC VLRKKRYVSG RQLPHAEGVV  480
RGKGRPLVQR TINQPVNTYS SNVKRTPSPL VELPVVLECR PDGLITNRPM RPEAFSPQRS  540
NEKEAKRRRE SDERERQKVY VSTAAAFEDC AVSIRFASRE EALPLRSTDA SLSSRVFPGQ  600
HPRVVAGVSK SRTSGV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10030.1	5e-75	Trihelix family protein