PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW32175.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

HB-other

Protein Properties

Length: 441aa MW: 48342 Da PI: 9.8923

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW32175.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	48.8	1.2e-15	24	76	3	51
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNr 51 k ++t+eq+e+Le+++ ++++ps +r+++ +++ +++ +q+kvWFqNr RWW32175.1 24 KYVRYTPEQVEALERVYSECPKPSSLRRQQIIRECpilsNIEPKQIKVWFQNR 76 5678************************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 441 aa Download sequence
MAMVVSGKEV GKGLQQAAAM DSGKYVRYTP EQVEALERVY SECPKPSSLR RQQIIRECPI 60 LSNIEPKQIK VWFQNRSFNQ LPHDFLHYLP SSCLTIFQDS PATTRTLDLA STLEVGSGAT 120 SRSVNETAST TYNLRSVLTI AFQFTYENHL RDSVAAMARQ YVRSVVTSVQ RVAMAIAPSR 180 PGCQIGVAPV FTFSNQAGLD MLETTLIALQ DITLENILDD NGRKVLCSEF PKIMQQKERS 240 FHRHKRCGAV PSAVINGRDL PCDVMLLRAP CDDVRDVGRH VVDPSSPSLP DKIRPASASR 300 KRHETTAVGR RVPQPAAARP PPLPRESEGP GRPIAANISE KGRERNEGGR DGLLCTDHLH 360 LPIRSDLLSS VGRESRGGAL SPSRRGGARR GRLDHDSHRR KPSCSPPPPP PPPESLAARP 420 IRVRETAAGG EHAHDATPPS K

Sequence ? help Back to Top

Protein Sequence Length: 441 aa Download sequence

MAMVVSGKEV GKGLQQAAAM DSGKYVRYTP EQVEALERVY SECPKPSSLR RQQIIRECPI  60
LSNIEPKQIK VWFQNRSFNQ LPHDFLHYLP SSCLTIFQDS PATTRTLDLA STLEVGSGAT  120
SRSVNETAST TYNLRSVLTI AFQFTYENHL RDSVAAMARQ YVRSVVTSVQ RVAMAIAPSR  180
PGCQIGVAPV FTFSNQAGLD MLETTLIALQ DITLENILDD NGRKVLCSEF PKIMQQKERS  240
FHRHKRCGAV PSAVINGRDL PCDVMLLRAP CDDVRDVGRH VVDPSSPSLP DKIRPASASR  300
KRHETTAVGR RVPQPAAARP PPLPRESEGP GRPIAANISE KGRERNEGGR DGLLCTDHLH  360
LPIRSDLLSS VGRESRGGAL SPSRRGGARR GRLDHDSHRR KPSCSPPPPP PPPESLAARP  420
IRVRETAAGG EHAHDATPPS K

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32880.1	2e-37	HD-ZIP family protein