PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | RWW31715.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 236aa MW: 26119.5 Da PI: 10.1087 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 65.7 | 8.9e-21 | 122 | 173 | 1 | 56 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56 s+y+GVr+++ +g+W+AeIrdp+ r r +lg+f+tae+Aa+a+++a+++++g+ RWW31715.1 122 SQYRGVRQRP-WGKWAAEIRDPR----RaVRKWLGTFDTAEDAARAYDRAALEFRGA 173 78********.**********82....48*************************985 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 236 aa Download sequence |
MSPKKEAAFH LSAVKPPQTG KEQQQRGMSS SYDWQPSFPS SSRLSREQET SIIVSALAHV 60 VSGYATAPAP AQLPVAETCR MCGIDGCLGC EFFFFDEDEV AVAASESRES GGARRRRKKK 120 KSQYRGVRQR PWGKWAAEIR DPRRAVRKWL GTFDTAEDAA RAYDRAALEF RGARARLNFP 180 FPDAQPPPAA QASHRAGRLE SSSTAGHPRV SPLQQEKPSV AERGMQEMIK VCEVII |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 114 | 120 | RRRRKKK |
2 | 115 | 121 | RRRKKKK |
3 | 115 | 121 | RRRRKKK |
4 | 116 | 122 | RRRKKKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G34410.1 | 2e-24 | ERF family protein |