PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW31547.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | MYB_related | ||||||||
Protein Properties | Length: 236aa MW: 26512.8 Da PI: 10.3106 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 52.8 | 9.4e-17 | 41 | 84 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r ++T+eE+e+l+ a + G++ W++Iar ++ gRt++ +k++w+ RWW31547.1 41 RRPFTEEEEERLLAAQQVQGNK-WALIARLFP-GRTDNAVKNHWHV 84 679*******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 236 aa Download sequence |
MGAVAKHETV GLMGSTKGCD CFAGKSCRLR WFNQLDPRIN RRPFTEEEEE RLLAAQQVQG 60 NKWALIARLF PGRTDNAVKN HWHVIMARRH RERSKLFRKR ASFPDQIHPV SAPREGSHRR 120 HLRFGSDSDY RVVSPSGFML WRAFSGSTDY PPSALKCSSG VLLDSSQLHG RSLRPHHQAY 180 RSLSADANCS DYAVSAGDDM DRDGSDSANR RAISEQINDR SKKVAFIDFL GVGIAS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69560.1 | 6e-38 | MYB family protein |