PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW31378.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family C3H
Protein Properties Length: 401aa    MW: 43492.8 Da    PI: 7.6296
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW31378.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH27.26.9e-09127148426
                 ---SGGGGTS--TTTTT-SS-SS CS
     zf-CCCH   4 elCrffartGtCkyGdrCkFaHg 26 
                 + C++f++ G Ck+Gd C FaHg
  RWW31378.1 127 AACPDFRK-GGCKRGDACEFAHG 148
                 78******.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 401 aa     Download sequence    
MMTTGGDGGQ LRYPTVHVPP SSLPFENMAA GTDYRLGGQE FPFEESTFTA LQRQLSRKGE  60
ETGAEEEDVE ETASAVDVYS SDEFRMYEFK VRRCARGRSH DWTECPFAHP GEKARRRDPR  120
KYHYSGAACP DFRKGGCKRG DACEFAHGVF ECWLHPARYR TQPCKDGTAC RRRVCFFAHT  180
PDQLRVLPQQ QQQQQQTSTN ASATVEKYDG SSLLQQAMES YISKHLMSSS PTSTLMSPTI  240
SPPSNSPPMS PSTAAALRRA SWSVGTSPNE IVASMRQLQL SKAKAKSAPS SWGFQLGSTL  300
FGSPRGTGTG TGTGFRTGLC GLPSIPTTPG TGVGGLAWLD DMGGGLAEEG EEPVERVVES  360
GRALRAKIFE KLSKECCVAK GAEAAPPMPA PDVGWVSELV K
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29190.12e-76C3H family protein