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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW30598.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | MYB_related | ||||||||
Protein Properties | Length: 166aa MW: 19188.7 Da PI: 7.55 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 36.2 | 1.4e-11 | 61 | 99 | 1 | 40 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqc 40 rg+WT eEd llv++++ +G g+W++ ar+ g R+ ++ RWW30598.1 61 RGPWTLEEDTLLVHYIAFHGEGRWNLLARCSG-DRSSSHL 99 89******************************.**99885 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 166 aa Download sequence |
MRPTNRSRHC WSLGQSEWSI NLGFSALFLF HVASARIPRR EQEMSGKRGS SNQHEDMELR 60 RGPWTLEEDT LLVHYIAFHG EGRWNLLARC SGDRSSSHLP FLIYLRLTFC CSYRLEENRQ 120 ELSFEVVELL EARYKARQSL SRGEVPDPRA PVQVGEQVII EALSLG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G25340.2 | 8e-15 | MYB family protein |