PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW29434.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family ARF
Protein Properties Length: 558aa    MW: 62291.7 Da    PI: 7.6077
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW29434.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3733.8e-23122222198
                 EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 
                 f+k+lt sd++++g +++p++ ae++       ++++++  +l+ +d++  sW++++iyr++++r++lt+GW+ Fv+ ++L +gD+v+F +  +++ +l
  RWW29434.1 122 FCKTLTASDTSTHGGFSVPRRAAEKIfpaldftMQPPAQ--ELVAKDLHDVSWTFRHIYRGQPKRHLLTTGWSVFVSTKRLSAGDSVLFIR--DEKSQL 216
                 99*****************************96555444..8************************************************4..466667 PP

                 EEEEE- CS
          B3  93 vvkvfr 98 
                 +++++ 
  RWW29434.1 217 LLGIRH 222
                 888875 PP
2Auxin_resp124.47.9e-41248330183
  Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                 aahaa+++s+F+++YnPras+seFv++++k++ka++++vs+GmRf+m+feteds  rr++Gt++g+sdldpvrW+nS+W +L+
  RWW29434.1 248 AAHAATNNSPFTIFYNPRASRSEFVIPLAKYNKAMYTQVSLGMRFRMMFETEDSGVRRYMGTITGISDLDPVRWKNSQWHNLQ 330
                 79******************************************************************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 558 aa     Download sequence    
MIVCATVCEA GEKKRIDSEL WHACAGPLVS LPPVGSLVVY FPQGHSEQVA ATMQKEIDSI  60
PNYPSLPSKL ICVLLDVTMH ADAETDEVYA QMTLQPVSKY DREAMLASEM GLKQNKQPTE  120
FFCKTLTASD TSTHGGFSVP RRAAEKIFPA LDFTMQPPAQ ELVAKDLHDV SWTFRHIYRG  180
QPKRHLLTTG WSVFVSTKRL SAGDSVLFIR DEKSQLLLGI RHANRQQPAL SSSVLSSDSM  240
HIGILAAAAH AATNNSPFTI FYNPRASRSE FVIPLAKYNK AMYTQVSLGM RFRMMFETED  300
SGVRRYMGTI TGISDLDPVR WKNSQWHNLQ VGWDESTATE RRTRVSIWEI EPVVTPFYMC  360
PPPYMRPNFA KSPGVPDDYE VGSGLHRVMP WLNDDFSLKD SQSAIFPGLS LVQWMAVQQN  420
RHVMASAMQP ACFSPMVASA TQDGVVTEDP TKMHQLQSSP LPQKSINLQQ QQFQQPGQLQ  480
QSQPQQLRPV ANQEPTDQQL MQQQTCNGQI GLQTHSSGQY LQPSHLQQQG LQGSSRWLQS  540
FTASIRSTAS STQKQCPG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19220.10.0ARF family protein