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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW29403.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | ERF | ||||||||
Protein Properties | Length: 238aa MW: 25314.2 Da PI: 11.183 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 66.7 | 4.5e-21 | 83 | 132 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr ++ +grW AeIrd + g r r++lg+f+taeeAa+a++aa+++l+g RWW29403.1 83 SYRGVRKRP-WGRWSAEIRDrV---G-RCRHWLGTFDTAEEAARAYDAAARRLRG 132 6********.**********55...2.59************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 238 aa Download sequence |
MEATTTITSS IGTGSTLPFF HVKTDPGEPA GSVGQDRPPE LDGIAAVVGY HVLFGRPQSD 60 SRTRSASAAG GEVTGVGAAT RTSYRGVRKR PWGRWSAEIR DRVGRCRHWL GTFDTAEEAA 120 RAYDAAARRL RGSKARTNFT IPSSSYIPTP ISTAPSSSSS SAAAAVISCP SATRSRKTNV 180 AGAGMPMKTR RKRRKGDEKD ESNRRCKAVT RFAQLFSSSP AVAHVDGGGQ PSTWDDPK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G80580.1 | 6e-22 | ERF family protein |