PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW29115.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

HSF

Protein Properties

Length: 475aa MW: 52479.7 Da PI: 4.7287

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW29115.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	96.7	2.3e-30	21	124	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHT....TEEE---SSBTTTTX..TTSEEEEESXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmY....gFkkvkdeekksksk..ekiweFkhksFkkgkke 92 Fl k+ye+++d++++ ++sws++g sfvv+++ +f +++Lp yFkh+nf+SF+RQLn+Y +F+ +++ k k ++ weF+++ F kg+++ RWW29115.1 21 FLLKTYEMVDDASTDAIVSWSSTGASFVVWNPIDFVTRLLPVYFKHNNFSSFIRQLNTYvrkpNFSPSSRFGFK---KidPERWEFANDDFVKGQNH 114 9********************************************************333333333333222...1349************ PP XXXXXXXXXX CS HSF_DNA-bind 93 llekikrkks 102 ll+ki+r+k RWW29115.1 115 LLKKIRRRKP 124 ******96 PP

Sequence ? help Back to Top
Protein Sequence Length: 475 aa Download sequence
REMDGGVPVG GNGGGGGPAP FLLKTYEMVD DASTDAIVSW SSTGASFVVW NPIDFVTRLL 60 PVYFKHNNFS SFIRQLNTYV RKPNFSPSSR FGFKKIDPER WEFANDDFVK GQNHLLKKIR 120 RRKPTHSHSH PPGGGLADAE RVALEGEIER LNQEKAGLED IIQKFMQQKS GTEIQMENLE 180 QRLADMEQRH IKILAFVQRA LQKPELMANL MKMAVASSMD ISVIHKKRRL PPVVDYSNEA 240 SANNSCADRS TSTNPEKGYI LDQDFCEKLK LELSSGIPDD NLITVVTHIS NEDNDCGQEL 300 ECLPSTPETL ELCGTGAPLC SIKNAVFVRE VDEDNGLFPC HLGLTLASST MEIDGGKFSS 360 STPDLVDQGE AHATDLKTSN TARENDLTIP VMTIQSNLTQ SADAKVVSSQ EVPPSNEASA 420 VHRPANDVFW QQFLTERPGS SDEEDASACL RQNLYDEQTE KSIPGNDNMC AVWSN

Sequence ? help Back to Top

Protein Sequence Length: 475 aa Download sequence

REMDGGVPVG GNGGGGGPAP FLLKTYEMVD DASTDAIVSW SSTGASFVVW NPIDFVTRLL  60
PVYFKHNNFS SFIRQLNTYV RKPNFSPSSR FGFKKIDPER WEFANDDFVK GQNHLLKKIR  120
RRKPTHSHSH PPGGGLADAE RVALEGEIER LNQEKAGLED IIQKFMQQKS GTEIQMENLE  180
QRLADMEQRH IKILAFVQRA LQKPELMANL MKMAVASSMD ISVIHKKRRL PPVVDYSNEA  240
SANNSCADRS TSTNPEKGYI LDQDFCEKLK LELSSGIPDD NLITVVTHIS NEDNDCGQEL  300
ECLPSTPETL ELCGTGAPLC SIKNAVFVRE VDEDNGLFPC HLGLTLASST MEIDGGKFSS  360
STPDLVDQGE AHATDLKTSN TARENDLTIP VMTIQSNLTQ SADAKVVSSQ EVPPSNEASA  420
VHRPANDVFW QQFLTERPGS SDEEDASACL RQNLYDEQTE KSIPGNDNMC AVWSN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G13980.1	1e-102	HSF family protein