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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW28897.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | ERF | ||||||||
Protein Properties | Length: 257aa MW: 27448.5 Da PI: 6.7111 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 23.3 | 1.6e-07 | 102 | 129 | 28 | 55 |
AP2 28 rkrfslgkfgtaeeAakaaiaarkkleg 55 r r++lg++ ++e+Aa+a +aa+ +l+g RWW28897.1 102 RERIWLGSYESPEKAARAFDAAAVCLRG 129 38************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 257 aa Download sequence |
MGSVAFNRCG LHTQSGHLRL WSPSARIPSS SGDWSIRGVQ LSHSSRHCLL RPLSSLQRTC 60 RSLVTLKGSP VEAPGEPLSG PNHLRRGTPA SPSEKGERSG DRERIWLGSY ESPEKAARAF 120 DAAAVCLRGR RARLNFPDSP PPRITAGAQP LTHQQIQAAA ARHAAAAPGP AQPPTPVDSP 180 AASSPASDEF TAGSDDALDW SFMDPQMGAP LTFDGYFPAP LDDFMYDFSS SVPATPLDVA 240 DDHCGIDFGS NSFLWSF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G19210.1 | 3e-17 | ERF family protein |