![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | RWW27853.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 215aa MW: 23328.5 Da PI: 9.7238 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 63.1 | 5.8e-20 | 26 | 75 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +++GVr ++ +gr++AeIrd ++ ++r++lg+f++ae+Aa+a++aa+ +l+g RWW27853.1 26 RFRGVRKRP-WGRFAAEIRDpWK----KTRVWLGTFDSAEDAARAYDAAAIALRG 75 79*******.**********883....5*************************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 215 aa Download sequence |
MRKGSAQAVD PLAAAQIGGA MAVEKRFRGV RKRPWGRFAA EIRDPWKKTR VWLGTFDSAE 60 DAARAYDAAA IALRGPKAKT NFPSPPSPFP PAALPAAAAH FPFHRHQQHY PQPPPPQRPT 120 SSSHSSTVES FSGPRLPSAA APIRLRPPIL KRQANPPPPP RVLNGDDDCH SDCGSSSSVI 180 DDDGDVVLMC RPPLPFDLNL LPLPDDDLHD TVLRL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G50640.1 | 8e-23 | ERF family protein |