PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | RWW27464.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 228aa MW: 25025.5 Da PI: 4.4907 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 61.5 | 1.8e-19 | 12 | 62 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 ++y+GVr++ +g+WvAeIr+p + r r +lg+f ta eAa a+++a+++++g RWW27464.1 12 CQYRGVRQRT-WGKWVAEIREP---N-RgNRLWLGTFPTALEAAMAYDEAARAMYG 62 68*****999.**********8...2.359***********************998 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 228 aa Download sequence |
MKGKGGPENP NCQYRGVRQR TWGKWVAEIR EPNRGNRLWL GTFPTALEAA MAYDEAARAM 60 YGPYARLNLP ERYGDSQPGA TNGSCESSMT SHHSHSDASV SSSGETKVIP KIEKMEERDN 120 GLSSAGAPMS TPSGNHKMEH SQPGYWNEDF PIDEFFLEAS LEGMDADCTG TYHQIGIGDA 180 SQRHGDALDL LFRPQNSDAE MLGAVPHIDE GLNGFDPDDC FLWPIEGD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G75490.1 | 3e-26 | ERF family protein |