PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW27393.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

GeBP

Protein Properties

Length: 495aa MW: 54891 Da PI: 9.9127

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW27393.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	50.9	4.5e-16	260	326	31	97
DUF573 31 sddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 d++ f++ +++s+ +++sql+eK+rrL+kKf+ +++++++g++p+ ++hd+++++l+ ++W+ RWW27393.1 260 PRDLNLFFDRFSESMPQPYTRSQLSEKLRRLRKKFRVMSARIARGQDPARLAPHDRDVLHLCTRLWH 326 569***************************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 495 aa Download sequence
MAAALGIPKE YGYVVLVLLS YIFLNLWMSF QVGKARKKYK VFYPTLYAIE SENKDAKRFN 60 CVQNSLEMMP VFFATLLVGG LQLPVIAAGL GGFYTVARFF YFKGYSSGLP ENRLRIGYYL 120 FSLATPVVDS SLPHFYPTQH GDRVLSDNPN PRSSSSSKPH SLLDRPSRLG SWELGESNPN 180 PSPLSPPPSQ PRSQAPNRPH CTDHERKDAI DRALNHGRAH PDPNSPRPNR IVHGFPCRCC 240 CWRRSSPGLL GCWSQGLVFP RDLNLFFDRF SESMPQPYTR SQLSEKLRRL RKKFRVMSAR 300 IARGQDPARL APHDRDVLHL CTRLWHPSYA ASSPFPAPDV LAPGGGGNKR RRPNPRPPSV 360 QDVPSPLPAP PPVPIATLPP PPALLPPTDE KVGYTAASTS MNAAHLGLKV EEDPLPPGMG 420 ADEAAAGKDE TRHLMAKTVL SVFDACLAEL KVTAATQGLG CQGNDLEKRW QEQRVAEMDV 480 LARRLRMVLE KAIQN

Sequence ? help Back to Top

Protein Sequence Length: 495 aa Download sequence

MAAALGIPKE YGYVVLVLLS YIFLNLWMSF QVGKARKKYK VFYPTLYAIE SENKDAKRFN  60
CVQNSLEMMP VFFATLLVGG LQLPVIAAGL GGFYTVARFF YFKGYSSGLP ENRLRIGYYL  120
FSLATPVVDS SLPHFYPTQH GDRVLSDNPN PRSSSSSKPH SLLDRPSRLG SWELGESNPN  180
PSPLSPPPSQ PRSQAPNRPH CTDHERKDAI DRALNHGRAH PDPNSPRPNR IVHGFPCRCC  240
CWRRSSPGLL GCWSQGLVFP RDLNLFFDRF SESMPQPYTR SQLSEKLRRL RKKFRVMSAR  300
IARGQDPARL APHDRDVLHL CTRLWHPSYA ASSPFPAPDV LAPGGGGNKR RRPNPRPPSV  360
QDVPSPLPAP PPVPIATLPP PPALLPPTDE KVGYTAASTS MNAAHLGLKV EEDPLPPGMG  420
ADEAAAGKDE TRHLMAKTVL SVFDACLAEL KVTAATQGLG CQGNDLEKRW QEQRVAEMDV  480
LARRLRMVLE KAIQN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	350	357	RRRPNPRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04930.2	4e-08	GeBP family protein