PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | RWW27328.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
|
||||||||
Family | NF-YB | ||||||||
Protein Properties | Length: 134aa MW: 15153.1 Da PI: 4.3359 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 59.7 | 6.8e-19 | 3 | 73 | 15 | 85 |
NF-YB 15 rimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkv 85 +i+k++lP + ++++d+++++ ec +efi +++se+++ c+r ++kti+++ +l al lGf +y+e++ + RWW27328.1 3 KIIKEMLPPDVRVARDTQDLLVECCVEFINLLSSESNEVCNRGDKKTIAPEHVLKALEVLGFGEYIEEVYA 73 89*****************************************************************9854 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 134 aa Download sequence |
MFKIIKEMLP PDVRVARDTQ DLLVECCVEF INLLSSESNE VCNRGDKKTI APEHVLKALE 60 VLGFGEYIEE VYAAYEQHKL DTLDSPKGSK FSGIEMTEEE ALAEQQRMFA EARARMNNGV 120 SIQKQPEADN NLES |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G23090.4 | 3e-72 | NF-YB family protein |