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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW26546.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | ERF | ||||||||
Protein Properties | Length: 157aa MW: 17753.2 Da PI: 10.0589 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53 | 8.5e-17 | 19 | 67 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++GVr +k +g+WvAeIr+p +kr r++lg++ t+ Aaka++ a +l+g RWW26546.1 19 FRGVRMRK-WGKWVAEIREP---NKRSRIWLGSYCTPVAAAKAYDTALFYLRG 67 8*****99.**********9...336*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 157 aa Download sequence |
MEGQLPPKKA GTKPKERLFR GVRMRKWGKW VAEIREPNKR SRIWLGSYCT PVAAAKAYDT 60 ALFYLRGRAA RLNFPDDVSV DDAGSGVDIG MPAAWIRKKA AEVGAKVDAL HLRSASVFCC 120 RSQEDRRRKE EKQYKNPDLN QEPTPESSDD EWSSGLQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G67190.1 | 5e-44 | ERF family protein |