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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW26540.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | ERF | ||||||||
Protein Properties | Length: 212aa MW: 22690.3 Da PI: 6.7839 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 59.6 | 7.4e-19 | 56 | 106 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GVr + +g+Wv+eIr+p++ + r++lg+f tae+Aa+a++ a+++++g RWW26540.1 56 SPYRGVRMRT-WGKWVSEIREPKK---KSRIWLGTFPTAEMAARAHDVAALAIKG 106 68*****998.**********854...6***********************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 212 aa Download sequence |
MKAAGANSPC SASSSFASSS RFCSSSSTSF SSTIEREAEA IGCKEKKEQG SGGKRSPYRG 60 VRMRTWGKWV SEIREPKKKS RIWLGTFPTA EMAARAHDVA ALAIKGRSAY LNFPELASQL 120 PRPASSTPKD IRAAAALAAA TAAGGHSSKT ETSSSHSPAP TPTPGDDDDG ALFDLPDILL 180 DLREDFSYIS SWAASMAEDG FELKFEEPFL WE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G44940.1 | 3e-44 | ERF family protein |