PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW26471.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

HSF

Protein Properties

Length: 716aa MW: 78122.1 Da PI: 9.0824

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW26471.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	76.9	3.4e-24	445	530	2	103
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl+k+y++++d++++++isw+e+g++fvv+ + efa+++LpkyFkh+nf+SF gF+k+ ++ weF+++ F++g+k+ll++i+ RWW26471.1 445 FLTKTYQLVDDPAVDDVISWNEDGSTFVVWRPAEFASDLLPKYFKHNNFSSF-------GFRKIVPDR---------WEFANDCFRRGEKRLLRDIH 525 9************************************************9.......9*999.........**************** PP XXXXX CS HSF_DNA-bind 99 rkkse 103 r+k++ RWW26471.1 526 RRKTS 530 986 PP

Sequence ? help Back to Top
Protein Sequence Length: 716 aa Download sequence
MLASPFYHLL LLAGASAAAA LLSTALRFPS LLLYGLHTYI HPDNPGGDGL RAVLRRPSGP 60 DAPPDPKRRP RSSSASQHRV PGFDDGNAQL LRLRLSDSQL RTRLLFPSFR AAFAASAVAF 120 TDLAVLRLLL PSDPSPAATI VAAVALLAVA HLLLLLSKLS LERSASKRSE KELSFVAGFL 180 GFLSALLIVF VLSPSLFDFE LGGVDAGSTK ATVSVLAGVL VGLLFVPASR AARAFWLGTD 240 QLRWNLAVVS CGAFTQVLLY VAVLAAAAAP LLWVIPVAVV PAGGEVGSVW FREFRVWALI 300 ASAVLQLMVL RPNVQMYLNE AVVSWYQRLH ASRVPDMDYG RAKVFLHNHY LCLVVLHFFA 360 PPVMTLLRGT ESKLLGLIHP PNHPSPLDHI PLAPLQFLLR PPKLLEGFEI FPPSFRTART 420 REGRAKMTPA SEPAEGQQRS LPTPFLTKTY QLVDDPAVDD VISWNEDGST FVVWRPAEFA 480 SDLLPKYFKH NNFSSFGFRK IVPDRWEFAN DCFRRGEKRL LRDIHRRKTS TAAPPLVPAT 540 IPVTAHVRRV ISSTNSGEEQ VLSSNSSSGL PPPRTAATRP RGEAELGEEN EWLRKENERL 600 CREVAQMKKL CSEIATLISR HASGRQERGE GVEGHEAAAP LLELMPPGPA AEVVEEEEEA 660 AKSEVPPSPP GASPKLFGVS IGVKRPRLED GDGSPLSQEV KPESVESAWP NPKEVL

Sequence ? help Back to Top

Protein Sequence Length: 716 aa Download sequence

MLASPFYHLL LLAGASAAAA LLSTALRFPS LLLYGLHTYI HPDNPGGDGL RAVLRRPSGP  60
DAPPDPKRRP RSSSASQHRV PGFDDGNAQL LRLRLSDSQL RTRLLFPSFR AAFAASAVAF  120
TDLAVLRLLL PSDPSPAATI VAAVALLAVA HLLLLLSKLS LERSASKRSE KELSFVAGFL  180
GFLSALLIVF VLSPSLFDFE LGGVDAGSTK ATVSVLAGVL VGLLFVPASR AARAFWLGTD  240
QLRWNLAVVS CGAFTQVLLY VAVLAAAAAP LLWVIPVAVV PAGGEVGSVW FREFRVWALI  300
ASAVLQLMVL RPNVQMYLNE AVVSWYQRLH ASRVPDMDYG RAKVFLHNHY LCLVVLHFFA  360
PPVMTLLRGT ESKLLGLIHP PNHPSPLDHI PLAPLQFLLR PPKLLEGFEI FPPSFRTART  420
REGRAKMTPA SEPAEGQQRS LPTPFLTKTY QLVDDPAVDD VISWNEDGST FVVWRPAEFA  480
SDLLPKYFKH NNFSSFGFRK IVPDRWEFAN DCFRRGEKRL LRDIHRRKTS TAAPPLVPAT  540
IPVTAHVRRV ISSTNSGEEQ VLSSNSSSGL PPPRTAATRP RGEAELGEEN EWLRKENERL  600
CREVAQMKKL CSEIATLISR HASGRQERGE GVEGHEAAAP LLELMPPGPA AEVVEEEEEA  660
AKSEVPPSPP GASPKLFGVS IGVKRPRLED GDGSPLSQEV KPESVESAWP NPKEVL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	66	72	PKRRPRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G62020.1	5e-61	HSF family protein