PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW26313.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | ERF | ||||||||
Protein Properties | Length: 233aa MW: 25336.4 Da PI: 5.7984 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 59.3 | 9.1e-19 | 68 | 118 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+++AeIrdp +g +r++lg+++ta eAa+a+++a+ +++g RWW26313.1 68 RYRGVRQRP-WGKFAAEIRDPARRG--ARVWLGTYDTAVEAARAYDRAAFQMRG 118 8********.**********95443..*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 233 aa Download sequence |
MEPSIGFDDS TLDLIRQYLL GDLPQPDSPA AFPCDGAYHF PEPAPGRRPS LTISVPPRPV 60 ADCDEAKRYR GVRQRPWGKF AAEIRDPARR GARVWLGTYD TAVEAARAYD RAAFQMRGRK 120 AILNFPHEIG SSGQWDAAAT TTTAAQVLSG KRKREAEEEE EAVTAIKRER SPAMEEGGDG 180 GFVPSMSACP LTPSSWKGVW DWEGADTKGI FNVPPLSPLS PHPSLGCAQV TVS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G51190.1 | 2e-37 | ERF family protein |