PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW25934.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | MYB_related | ||||||||
Protein Properties | Length: 206aa MW: 23093.9 Da PI: 5.1641 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 53.8 | 4.3e-17 | 3 | 45 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 ++ W +eEd++l++a+ + G++ W+ Ia++++ gRt++++k++w+ RWW25934.1 3 KDTWCEEEDKILIQAHSEIGNK-WAEIAKRLP-GRTENSIKNHWN 45 578*******************.*********.***********8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 206 aa Download sequence |
MQKDTWCEEE DKILIQAHSE IGNKWAEIAK RLPGRTENSI KNHWNATKRR QFARRRCRNT 60 RNPKSGVLLQ NYIKSLALSP APSTRKRKPG NSSKATVGAM PAEEPSTAAG AYRDGDDHLV 120 PACDFSDVMV SLLFEDEEKV PTEGYDVGHL FDQLGCGLGV DKSLEMELEY WDDIVATTPQ 180 SYEVVKPEMD LVEMISQNSS TSNNMS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G18770.1 | 7e-38 | MYB family protein |