PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW25745.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | HSF | ||||||||
Protein Properties | Length: 223aa MW: 24446.2 Da PI: 10.7642 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 74.4 | 2e-23 | 78 | 136 | 2 | 60 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHT CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmY 60 Fl+k+ye+++d++l+ ++sw g+sfvv+d+ efa+ vLp++Fkh+nf+SFvRQLn+Y RWW25745.1 78 FLSKTYELVDDPALDAVLSWAPAGRSFVVWDPVEFARAVLPRHFKHKNFSSFVRQLNTY 136 9*********************************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 223 aa Download sequence |
MDFEGRSASN PSRFPRLRPK MEPPGEPSRL SPRSPSVSTL ADSAAAAPSA LRPDGGGGGG 60 EGVPRPLEAL QSAPIPPFLS KTYELVDDPA LDAVLSWAPA GRSFVVWDPV EFARAVLPRH 120 FKHKNFSSFV RQLNTYVGIL SLFVNLFSRL YMHAGAGVVF LRKASVMVDF YRCRSLSGGL 180 SLAAARKREK KREMSAAREP WDGVVDKENL VRQRLLCRGL LLV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G03720.1 | 4e-34 | HSF family protein |