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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW25475.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | MYB_related | ||||||||
Protein Properties | Length: 238aa MW: 26463.1 Da PI: 7.2203 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 23.6 | 1.2e-07 | 2 | 37 | 12 | 47 |
HHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 12 lvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++ + ++lG+g+W+ Iar + Rt+ q+ s+ qky RWW25475.1 2 FLMGLQKLGKGDWRGIARNFVVSRTPTQVASHAQKY 37 77789******************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 238 aa Download sequence |
MFLMGLQKLG KGDWRGIARN FVVSRTPTQV ASHAQKYFIR QSTAASRRKR HSSLFDIVPE 60 MPMDEAPNQE EHLLPHSPNE LESTTQLPTL HLGLQGPEPT AELSTTKHAA QLIDCIPLRH 120 NNHPVPMLPT FYPTFLPVPA PFWPSNQITT AIEETMRETH KIVMPTPVVP KEPVNADEVV 180 SMSKLSIGED LRHHREPATL SLTPRGTSSS SRQSAFHIDS SMAVPDLNQT NSSPIHAV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G47390.1 | 5e-48 | MYB_related family protein |