PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW25451.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

C2H2

Protein Properties

Length: 337aa MW: 36253.5 Da PI: 6.9977

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW25451.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.7	0.00039	4	26	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C ++Fs+ L H+r+H RWW25451.1 4 HRCSICFRRFSSGRALGGHMRRH 26 79********************9 PP
2	zf-C2H2	11.7	0.00077	199	221	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C+k+F++ L H+ +H RWW25451.1 199 HQCGTCKKVFRSYQALGGHLASH 221 79*************99999988 PP

Sequence ? help Back to Top
Protein Sequence Length: 337 aa Download sequence
MEKHRCSICF RRFSSGRALG GHMRRHVTAA TLPTKLLGHH CSAVSAALPP CVGAVEEEEE 60 EEEELTKEAA YGLRENPRKS FRLVDPEFSS AFAAIEPAGS SSVVVQDGES ETESLCAAAT 120 DHRRLSKRPR HRSHAPPTSE PESSDVTTEE DVALCLMMLS RDSWTSGKAS LLFDGNDEEG 180 DGRRIAARSR PPRRGRSKHQ CGTCKKVFRS YQALGGHLAS HRRPTACTPA VRSRTDGDDD 240 SRASVDAKVH ECPFCFRVFP SGQALGGHKR SHLTTSAVTS LASVPPLSCS TPTTSTAGGK 300 SGDVIGLIDL NLPAPLDDDT ALSAVSDFEF IPNCTVN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G60580.1	1e-44	C2H2 family protein