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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW25269.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | NAC | ||||||||
Protein Properties | Length: 126aa MW: 13727.9 Da PI: 8.49 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 48.9 | 2.1e-15 | 15 | 69 | 1 | 49 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......leleevikevdiykvePwdLpk 49 lppGfrFhP+deelv++yL kkv+g++ l +++ +vd++k+ePw+Lp RWW25269.1 15 LPPGFRFHPRDEELVCDYLMKKVAGDDgggsggLYGCHMMIHVDLNKCEPWHLPG 69 79************************9888888444467999***********93 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 126 aa Download sequence |
MSIAMSYLSM MEARLPPGFR FHPRDEELVC DYLMKKVAGD DGGGSGGLYG CHMMIHVDLN 60 KCEPWHLPGI TPQPPTTLPV ARGTTYGLSA LQKLRVLFLG GSSSSSSSSM RSLFSFPALV 120 FDSVRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G12977.1 | 4e-20 | NAC family protein |