PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW25131.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | Trihelix | ||||||||
Protein Properties | Length: 185aa MW: 19883 Da PI: 5.0211 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 33.4 | 1.2e-10 | 89 | 140 | 34 | 86 |
trihelix 34 vskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 vs+++ ++++ +s +qC++k++nl+kryk + ++ + + ++ ++p+f+++e RWW25131.1 89 VSERCNKHKVGKSVEQCTNKIDNLKKRYKVECQWLNCGGVPAG-HWPWFKKME 140 8***********************************9954444.7*******8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 185 aa Download sequence |
MASCDDDYVL LGDEAQSQHQ AQTRAVPFSG PTATKGFVVD GGGGEDHEGC GEAFGQTDAS 60 KCLVAPAFDD HCFVVDDNTF ADRHSATIVS ERCNKHKVGK SVEQCTNKID NLKKRYKVEC 120 QWLNCGGVPA GHWPWFKKME QIVGSSSSSP KTAPDEDKSI IVGGPAAWYS LAGVGPRNVD 180 PTVDY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G10030.2 | 4e-24 | Trihelix family protein |