PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW24601.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

FAR1

Protein Properties

Length: 433aa MW: 49242.6 Da PI: 8.7217

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW24601.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	90	3.3e-28	190	278	2	89
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 fY +YA++vGFsvr+sks++s+++++i++r+fvCskeg++ ++ k + k++r+ra+ r gC+a+++v +++ g+w+vtkl++eHnH + RWW24601.1 190 FYMAYASRVGFSVRISKSRRSRNDESIIMRRFVCSKEGFHLRKGKFdDGKKKRKRATIREGCNAMIEVIQKYYGRWVVTKLVKEHNHVV 278 9*************************************9988865789999********************************76 PP
2	FAR1	45.3	2.8e-14	312	374	2	63
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCk 63 fY +YA++vGF+vr++ s++s+r++++++r+fvC+keg++ +e++ ++k++r+r+ tr + k RWW24601.1 312 FYYAYASRVGFDVRIRLSRRSTRDETFVMRRFVCTKEGFTPHEDSYdESKKKRNRTPTREDAK 374 9**************************************999888745566667777776655 PP

Sequence ? help Back to Top
Protein Sequence Length: 433 aa Download sequence
MMKLAHRMVM DFCASFSASA GNKWTMLSGI NDDLRVTLQR TDSSLPHGVV LSAATSIWLP 60 LPRDRVFGFL KDEQNRPQVA LQLHIGCGRR SFNQLRSNGK AFGLPGYCCI PNADEQLSRS 120 METTSSEDEE SLKDNNVDLN DDNIEHHIAF DVGNQLADAG NLFSSHQQNS ENSEPFVGME 180 FESEESAKLF YMAYASRVGF SVRISKSRRS RNDESIIMRR FVCSKEGFHL RKGKFDDGKK 240 KRKRATIREG CNAMIEVIQK YYGRWVVTKL VKEHNHVVAA PSRVLYVAPE AYGNADPYLG 300 MEFPSHEAAQ TFYYAYASRV GFDVRIRLSR RSTRDETFVM RRFVCTKEGF TPHEDSYDES 360 KKKRNRTPTR EDAKNGFVLD ECVRYNELYR DAVKYAKEGS TSEEVYTVAK NALQIGFAQV 420 LAAKKSIVSQ CTM

Sequence ? help Back to Top

Protein Sequence Length: 433 aa Download sequence

MMKLAHRMVM DFCASFSASA GNKWTMLSGI NDDLRVTLQR TDSSLPHGVV LSAATSIWLP  60
LPRDRVFGFL KDEQNRPQVA LQLHIGCGRR SFNQLRSNGK AFGLPGYCCI PNADEQLSRS  120
METTSSEDEE SLKDNNVDLN DDNIEHHIAF DVGNQLADAG NLFSSHQQNS ENSEPFVGME  180
FESEESAKLF YMAYASRVGF SVRISKSRRS RNDESIIMRR FVCSKEGFHL RKGKFDDGKK  240
KRKRATIREG CNAMIEVIQK YYGRWVVTKL VKEHNHVVAA PSRVLYVAPE AYGNADPYLG  300
MEFPSHEAAQ TFYYAYASRV GFDVRIRLSR RSTRDETFVM RRFVCTKEGF TPHEDSYDES  360
KKKRNRTPTR EDAKNGFVLD ECVRYNELYR DAVKYAKEGS TSEEVYTVAK NALQIGFAQV  420
LAAKKSIVSQ CTM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G06250.1	2e-30	FAR1 family protein