PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW24241.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | HB-other | ||||||||
Protein Properties | Length: 234aa MW: 27063.5 Da PI: 8.8385 | ||||||||
Description | HB-other family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 60.5 | 2.6e-19 | 11 | 68 | 4 | 57 |
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++t+eq+++Le++++++++ps ++r++L +++ +++ +q+kvWFqNrR +ek+ RWW24241.1 11 YVRYTAEQVDALERVYAECPKPSSTRRQQLIRECpilaNIEPKQIKVWFQNRRCREKQ 68 6789****************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 234 aa Download sequence |
MEKHSMDAGK YVRYTAEQVD ALERVYAECP KPSSTRRQQL IRECPILANI EPKQIKVWFQ 60 NRRCREKQRK ETSRLQAVNR KLTAMNKLLM EENERLQKQV TQLVHENAYM RQQLQNFLSK 120 ATGTAIAEII KDRPAWFHDC RNLEVFTMFP TGNGGTIELV LFFFCFVCST LKLGPICFGT 180 DVCSDYISSC TGLLDPKAWS VPEVLRPLYE SSRVVAQKMT IAVGNYCMLV LWHL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G60690.1 | 7e-88 | HD-ZIP family protein |