PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW24236.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

ARF

Protein Properties

Length: 676aa MW: 74703.7 Da PI: 6.6137

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW24236.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	76	4.2e-24	125	226	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 f k+lt+sd+++ g +++p+ +ae++ ++ +s ++ +d +g++W++++iyr++++r++lt+GW++Fv++++L +gD++vF + +++ l RWW24236.1 125 FAKTLTQSDANNGGGFSVPRYCAETIfprldysADPPVQS--VIAKDVHGKVWKFRHIYRGTPRRHLLTTGWSNFVNQKKLVAGDSIVFL--RAENGDL 219 89***************************986666675..999*****************************************..4488999 PP EEEEE-S CS B3 93 vvkvfrk 99 +v+++r+ RWW24236.1 220 CVGIRRA 226 **997 PP
2	Auxin_resp	115	6.8e-38	294	377	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 aa+ a+++++FevvY+Prast+eF+vk++ v++al++++ +GmRfkmafetedss++++ +Gt+++v+ +dp+rWpnS+Wr+L+ RWW24236.1 294 AATLAANGQPFEVVYHPRASTPEFCVKAAAVKAALRIQWYPGMRFKMAFETEDSSRISWfMGTISSVQVADPIRWPNSPWRLLQ 377 68899*****************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 676 aa Download sequence
MLVFDESMKG SSTKDNDKCL DSQLWHACAG GMVQMPAMKS RVYYFPQGHA EHAQGVVDFG 60 NPQQIPPFIL CQVTTVKFMA DLETDEVFAK IRMAPIRSAK PDYIEDEGLI LEMNEVDVHE 120 KPTSFAKTLT QSDANNGGGF SVPRYCAETI FPRLDYSADP PVQSVIAKDV HGKVWKFRHI 180 YRGTPRRHLL TTGWSNFVNQ KKLVAGDSIV FLRAENGDLC VGIRRAKRGG VGDSPETQSA 240 WSPQGRNGAS SYGGLSAILT EEESKFMRCN DSHSVVSRGI RGRGQVRAGS VDEAATLAAN 300 GQPFEVVYHP RASTPEFCVK AAAVKAALRI QWYPGMRFKM AFETEDSSRI SWFMGTISSV 360 QVADPIRWPN SPWRLLQVTW DEPDLLQNVK CVNPWLVELV SNMPAINLGH LPPPIKKPRV 420 LQQPPFEGQF PVRMVSGTPS DPRDSQYCCF SDSAPAGIQG ARHAQFDISL SDLHLNKLQT 480 GLFHAGFHRL DHVTPPSRIS TGVVVGNPTI HDKVSCLLTS GHPSQGLNKS CNGKLPQLVL 540 FGQPILTEQQ ILLCKSETMI FDDDTGPSSS DGNLEKTANV ADGSGFAINQ KGPLEAFPHH 600 RYHRALELII EAEHCKVFME SEDVGQSLDL SVFGSYEELY ERLGDMFGIE KSEMITHVFY 660 KDAAGALKHA GDEPFR

Sequence ? help Back to Top

Protein Sequence Length: 676 aa Download sequence

MLVFDESMKG SSTKDNDKCL DSQLWHACAG GMVQMPAMKS RVYYFPQGHA EHAQGVVDFG  60
NPQQIPPFIL CQVTTVKFMA DLETDEVFAK IRMAPIRSAK PDYIEDEGLI LEMNEVDVHE  120
KPTSFAKTLT QSDANNGGGF SVPRYCAETI FPRLDYSADP PVQSVIAKDV HGKVWKFRHI  180
YRGTPRRHLL TTGWSNFVNQ KKLVAGDSIV FLRAENGDLC VGIRRAKRGG VGDSPETQSA  240
WSPQGRNGAS SYGGLSAILT EEESKFMRCN DSHSVVSRGI RGRGQVRAGS VDEAATLAAN  300
GQPFEVVYHP RASTPEFCVK AAAVKAALRI QWYPGMRFKM AFETEDSSRI SWFMGTISSV  360
QVADPIRWPN SPWRLLQVTW DEPDLLQNVK CVNPWLVELV SNMPAINLGH LPPPIKKPRV  420
LQQPPFEGQF PVRMVSGTPS DPRDSQYCCF SDSAPAGIQG ARHAQFDISL SDLHLNKLQT  480
GLFHAGFHRL DHVTPPSRIS TGVVVGNPTI HDKVSCLLTS GHPSQGLNKS CNGKLPQLVL  540
FGQPILTEQQ ILLCKSETMI FDDDTGPSSS DGNLEKTANV ADGSGFAINQ KGPLEAFPHH  600
RYHRALELII EAEHCKVFME SEDVGQSLDL SVFGSYEELY ERLGDMFGIE KSEMITHVFY  660
KDAAGALKHA GDEPFR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G30080.1	0.0	ARF family protein