PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW23877.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | MYB_related | ||||||||
Protein Properties | Length: 189aa MW: 21561.1 Da PI: 9.7502 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 46.3 | 9.9e-15 | 17 | 75 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT............TTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg............kgRtlkqcksrwqky 47 +g+WT++Ed+ll + v ++G g W+++++ g gRt++++k++w+++ RWW23877.1 17 KGPWTAQEDKLLMEHVSLHGDGKWNSVSKLTGlrrngkscrlslPGRTDNEIKNYWRTH 75 79*******************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 189 aa Download sequence |
MDGQLGWGTL DNDVWRKGPW TAQEDKLLME HVSLHGDGKW NSVSKLTGLR RNGKSCRLSL 60 PGRTDNEIKN YWRTHFKKSK PSKNVEQARA RHLIRQRQEK KQGQEEQQHL HHQGAQQQQA 120 DMRAPMKQAE EAAMADDMAE MTYMYSVSQP TGRDTKSIVI QSHTTKHGGD QEMNTAAHGE 180 RFSPLLACS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G13480.1 | 1e-31 | MYB family protein |